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Limsoon Wong

Papers on DiSC'04


Bioinformatics Adventures in Database Research

Publications


Note: Links lead to the DBLP on the Web.

Limsoon Wong

Yi-Ping Phoebe Chen , Limsoon Wong: Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore Imperial College Press, London 2005

Yi-Ping Phoebe Chen , Limsoon Wong: Preface. APBC 2005

Guozhu Dong , Chunyu Jiang , Jian Pei , Jinyan Li , Limsoon Wong: Mining Succinct Systems of Minimal Generators of Formal Concepts. DASFAA 2005 : 175-187

Li Lin , Limsoon Wong, Tzeyun Leong , Pohsan Lai : LinkageTracker: A Discriminative Pattern Tracking Approach to Linkage Disequilibrium Mapping. DASFAA 2005 : 30-42

Haiquan Li , Jinyan Li , Limsoon Wong, Mengling Feng , Yap-Peng Tan : Relative Risk and Odds Ratio: A Data Mining Perspective. PODS 2005

Huiqing Liu , Hao Han , Jinyan Li , Limsoon Wong: DNAFSMiner: a web-based software toolbox to recognize two types of functional sites in DNA sequences. Bioinformatics 21 (5): 671-673 (2005)

Jinyan Li , Huiqing Liu , Limsoon Wong: Use of Built-in Features in the Interpretation of High-dimensional Cancer Diagnosis Data.. APBC 2004 : 67-74

Huiqing Liu , Jinyan Li , Limsoon Wong: Selection of Patient Samples and Genes for Outcome Prediction. CSB 2004 : 382-392

Huiqing Liu , Hao Han , Jinyan Li , Limsoon Wong: Using amino acid patterns to accurately predict translation initiation sites. In Silico Biology 4 : (2004)

Jinyan Li , Guozhu Dong , Kotagiri Ramamohanarao , Limsoon Wong: DeEPs: A New Instance-Based Lazy Discovery and Classification System. Machine Learning 54 (2): 99-124 (2004)

Vladimir B. Bajic , Vladimir Brusic , Jinyan Li , See-Kiong Ng , Limsoon Wong: From Informatics to Bioinformatics. APBC 2003 : 3-12

Jinyan Li , Huiqing Liu , Limsoon Wong: Mean-entropy discretized features are effective for classifying high-dimensional biomedical data. BIOKDD 2003 : 17-24

Jinyan Li , Huiqing Liu , See-Kiong Ng , Limsoon Wong: Discovery of significant rules for classifying cancer diagnosis data. ECCB 2003 : 93-102

Jinyan Li , See-Kiong Ng , Limsoon Wong: Bioinformatics Adventures in Database Research. ICDT 2003 : 31-46

Jinyan Li , Limsoon Wong: Using Rules to Analyse Bio-medical Data: A Comparison between C4.5 and PCL. WAIM 2003 : 254-265

Jinyan Li , Huiqing Liu , James R. Downing , Allen Eng-Juh Yeoh , Limsoon Wong: Simple rules underlying gene expression profiles of more than six subtypes of acute lymphoblastic leukemia (ALL) patients. Bioinformatics 19 (1): 71-78 (2003)

Guozhu Dong , Leonid Libkin , Limsoon Wong: Incremental recomputation in local languages. Inf. Comput. 181 (2): 88-98 (2003)

Jinyan Li , Limsoon Wong: Solving the Fragmentation Problem of Decision Trees by Discovering Boundary Emerging Patterns. ICDM 2002 : 653-656

Beng Chin Ooi , HweeHwa Pang , Hao Wang , Limsoon Wong, Cui Yu : Fast Filter-and-Refine Algorithms for Subsequence Selection. IDEAS 2002 : 243-255

Jinyan Li , Limsoon Wong: Geography of Differences between Two Classes of Data. PKDD 2002 : 325-337

Lynette Hirschman , Jong C. Park , Jun-ichi Tsujii , Cathy H. Wu , Limsoon Wong: Literature Data Mining for Biology - Session Introduction. Pacific Symposium on Biocomputing 2002 : 323-325

Jinyan Li , Limsoon Wong: Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns . Bioinformatics 18 (10): 1406-1407 (2002)

Lynette Hirschman , Jong C. Park , Jun-ichi Tsujii , Limsoon Wong, Cathy H. Wu : Accomplishments and challenges in literature data mining for biology. Bioinformatics 18 (12): 1553-1561 (2002)

Jinyan Li , Limsoon Wong: Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns. Bioinformatics 18 (5): 725-734 (2002)

Christian Schönbach , Judice L. Y. Koh , Darren R. Flower , Limsoon Wong, Vladimir Brusic : FIMM, a database of functional molecular immunology: update 2002. Nucleic Acids Research 30 (1): 226-229 (2002)

Leonid Libkin , Limsoon Wong: Lower bounds for invariant queries in logics with counting. Theor. Comput. Sci. 288 (1): 153-180 (2002)

Jun-ichi Tsujii , Limsoon Wong: Natural Language Processing for Biology - Session Introduction. Pacific Symposium on Biocomputing 2001 : 372-373

Limsoon Wong: PIES, A Protein Interaction Extraction System. Pacific Symposium on Biocomputing 2001 : 520-531

Lauri Hella , Leonid Libkin , Juha Nurmonen , Limsoon Wong: Logics with aggregate operators. J. ACM 48 (4): 880-907 (2001)

Kenneth A. Ross , James R. Hamilton , Laks V. S. Lakshmanan , Limsoon Wong: Reminiscences on Influential Papers. SIGMOD Record 30 (4): 90-91 (2001)

Limsoon Wong: Kleisli, its Exchange Format, Supporting Tools, and an Application in Protein Interaction Extraction. BIBE 2000 : 21-28

Limsoon Wong: The functional guts of the Kleisli query system. ICFP 2000 : 1-10

Limsoon Wong: Kleisli, a functional query system. J. Funct. Program. 10 (1): 19-56 (2000)

Christian Schönbach , Judice L. Y. Koh , Xin Sheng , Limsoon Wong, Vladimir Brusic : FIMM, a database of functional molecular immunology. Nucleic Acids Research 28 (1): 222-224 (2000)

Guozhu Dong , Leonid Libkin , Limsoon Wong: Local properties of query languages. Theor. Comput. Sci. 239 (2): 277-308 (2000)

Leonid Libkin , Limsoon Wong: On the Power of Incremental Evaluation in SQL-Like Languages. DBPL 1999 : 17-30

Guozhu Dong , Xiuzhen Zhang , Limsoon Wong, Jinyan Li : CAEP: Classification by Aggregating Emerging Patterns. Discovery Science 1999 : 30-42

Lauri Hella , Leonid Libkin , Juha Nurmonen , Limsoon Wong: Logics with Aggregate Operators. LICS 1999 : 35-44

Elisa Bertino , Barbara Catania , Limsoon Wong: Finitely Representable Nested Relations. Inf. Process. Lett. 70 (4): 165-173 (1999)

Jing Chen , Limsoon Wong, Louxin Zhang : A Protein Patent Query System Powered By Kleisli. SIGMOD Conference 1998 : 593-595

Leonid Libkin , Limsoon Wong: Unary Quantifiers, Transitive Closure, and Relations of Large Degree. STACS 1998 : 183-193

Michael Benedikt , Guozhu Dong , Leonid Libkin , Limsoon Wong: Relational Expressive Power of Constraint Query Languages. J. ACM 45 (1): 1-34 (1998)

Wang Chiew Tan , Ke Wang , Limsoon Wong: A Graphical Interface to Genome Multidatabases. J. Database Manag. 9 (1): 24-32 (1998)

Leonid Libkin , Limsoon Wong: Incremental Recomputation of Recursive Queries with Nested Sets and Aggregate Functions. DBPL 1997 : 222-238

Leonid Libkin , Limsoon Wong: On the Power of Aggregation in Relational Query Languages. DBPL 1997 : 260-280

Guozhu Dong , Leonid Libkin , Limsoon Wong: Local Properties of Query Languages. ICDT 1997 : 140-154

Guozhu Dong , Limsoon Wong: Some Relationships between the FOIES and S1 Arity Hierarchies. Bulletin of the EATCS 61 : (1997)

Susan B. Davidson , G. Christian Overton , Val Tannen , Limsoon Wong: BioKleisli: A Digital Library for Biomedical Researchers. Int. J. on Digital Libraries 1 (1): 36-53 (1997)

Leonid Libkin , Limsoon Wong: Query Languages for Bags and Aggregate Functions. J. Comput. Syst. Sci. 55 (2): 241-272 (1997)

Wang Chiew Tan , Ke Wang , Limsoon Wong: QUICK: Graphical User Interface to Multiple Databases. DEXA Workshop 1996 : 404-409

Michael Benedikt , Guozhu Dong , Leonid Libkin , Limsoon Wong: Relational Expressive Power of Constraint Query Languages. PODS 1996 : 5-16

Leonid Libkin , Rona Machlin , Limsoon Wong: A Query Language for Multidimensional Arrays: Design, Implementation, and Optimization Techniques. SIGMOD Conference 1996 : 228-239

Leonid Libkin , Limsoon Wong: Semantic Representations and Query Labguages for Or-Sets. J. Comput. Syst. Sci. 52 (1): 125-142 (1996)

Limsoon Wong: Normal Forms and Conservative Extension Properties for Query Languages over Collection Types. J. Comput. Syst. Sci. 52 (3): 495-505 (1996)

Guozhu Dong , Leonid Libkin , Limsoon Wong: On Impossibility of Decremental Recomputation of Recursive Queries in Relational Calculus and SQL. DBPL 1995 : 7

Dan Suciu , Limsoon Wong: On Two Forms of Structural Recursion. ICDT 1995 : 111-124

Peter Buneman , Susan B. Davidson , Kyle Hart , G. Christian Overton , Limsoon Wong: A Data Transformation System for Biological Data Sources. VLDB 1995 : 158-169

Leonid Libkin , Limsoon Wong: On Representation and Querying Incomplete Information in Databases with Bags. Inf. Process. Lett. 56 (4): 209-214 (1995)

Limsoon Wong: An Introduction to Remy's Fast Polymorphic Record Projection. SIGMOD Record 24 (3): 34-39 (1995)

Limsoon Wong: Polymorphic Queries Across Sets, Bags, and Lists. SIGPLAN Notices 30 (4): 39-44 (1995)

Peter Buneman , Shamim A. Naqvi , Val Tannen , Limsoon Wong: Principles of Programming with Complex Objects and Collection Types. Theor. Comput. Sci. 149 (1): 3-48 (1995)

Leonid Libkin , Limsoon Wong: New Techniques for Studying Set Languages, Bag Languages and Aggregate Functions. PODS 1994 : 155-166

Leonid Libkin , Limsoon Wong: Conservativity of Nested Relational Calculi with Internal Generic Functions. Inf. Process. Lett. 49 (6): 273-280 (1994)

Peter Buneman , Leonid Libkin , Dan Suciu , Val Tannen , Limsoon Wong: Comprehension Syntax. SIGMOD Record 23 (1): 87-96 (1994)

Limsoon Wong: Querying Nested Collections. Univ. Pennsylvania 1994

Anne H. H. Ngu , Ling-Ling Yan , Limsoon Wong: Heterogeneous Query Optimization Using Maximal Sub-Queries. DASFAA 1993 : 413-420

Anne H. H. Ngu , Limsoon Wong: PINOL: A Persistent Inferential Object Oriented Language for Databases. DASFAA 1993 : 57-64

Leonid Libkin , Limsoon Wong: Aggregate Functions, Conservative Extensions, and Linear Orders. DBPL 1993 : 282-294

Leonid Libkin , Limsoon Wong: Some Properties of Query Languages for Bags. DBPL 1993 : 97-114

Limsoon Wong: Normal Forms and Conservative Properties for Query Languages over Collection Types. PODS 1993 : 26-36

Leonid Libkin , Limsoon Wong: Semantic Representations and Query Languages for Or-sets. PODS 1993 : 37-48

Val Tannen , Peter Buneman , Limsoon Wong: Naturally Embedded Query Languages. ICDT 1992 : 140-154

Anne H. H. Ngu , Limsoon Wong, Surjatini Widjojo : On Canonical and Non-canonical Classifications. DOOD 1991 : 371-390

Limsoon Wong, Beng Chin Ooi : Treating Failure As Value. SIGPLAN Notices 25 (1): 29-32 (1990)

Limsoon Wong, Beng Chin Ooi : Treating failure as state. SIGPLAN Notices 25 (8): 24-26 (1990)

Limsoon Wong: Inference Rules in Object Oriented Programminh Systems. DOOD 1989 : 493-509

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