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Fast Frequent String Mining Using Suffix Arrays


Johannes Fischer, Volker Heun, and Stefan Kramer

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Return to Session 3: Pattern Analysis on Text and Structured Data


Abstract

We present a method to mine strings that are frequent in one database and infrequent in another. The method uses suffix- and lcp-arrays that can be computed extremely fast and space efficiently, and further exhibit a good locality behavior. Experiments with several biologically relevant data sets show that our approach outperforms existing methods in terms of time and space.


©2006 Association for Computing Machinery